* B Pfeuty, E Courtade, Q Thommen
Fine-tuned control of stress priming and thermotolerance,
Physical biology 18 (4), 04LT02 ((2021)
* J Hurbain, D Labavić, Q Thommen, B Pfeuty
Theoretical study of the impact of adaptation on cell-fate heterogeneity and fractional killing
Scientific Reports 10 (1), 1-13 (2020)
* Guilbert, M., Anquez, F., Pruvost, A., Thommen, Q. and Courtade, E.,
Protein level variability determines phenotypic heterogeneity in proteotoxic stress response.
FEBS J. doi:10.1111/febs.15297 (2020)
* D Labavic, MT Ladjimi, E Courtade, B Pfeuty, Q Thommen
Mammalian Cell Sensitivity to Hyperthermia in Various Cell Lines : A new universal and predictive description 
International Journal of Hyperthermia, 37, 506-516 (2020)
* Ladjimi, M. T.;  Labavic, D.;  Guilbert, M.;  Anquez, F.;  Pruvost, A.;  Courtade, E.;  Pfeuty, B.;  Thommen, Q., 
Dynamical thermal dose models and dose time-profile effects  
International Journal of Hyperthermia DOI: 10.1080/02656736.2019.1633478 (2019)
* D. Labavic, M. T.  Ladjimi, Q.  Thommen, B. Pfeuty, 
Scaling laws of cell-fate responses to transient stress, 
Journal of Theoretical Biology  DOI: 10.1016/J.JTBI.2019.06.014 (2019)
* A. Sivéry, E. Courtade and Q. Thommen,
A minimal titration model of the mammalian dynamical heat shock response,
Phys. Biol. 13, 066008 (2016).
* B. Pfeuty and Q. Thommen,
Adaptive Benefits of Storage Strategy and Dual AMPK/TOR Signaling in Metabolic Stress Response,
Plos One 11, e0160247 (2016).

2009--2015

Q. Thommen, B. Pfeuty, P. Schatt, A. Bijoux, F.-Y. Bouget, M. Lefranc, 
Probing entrainment of ostreococcus tauri circadian clock by blue and green light through a mathematical modeling approach, 
Frontiers in Genetics 5, 00065 (2015).
F.-Y. Bouget, M. Lefranc, Q. Thommen, B. Pfeuty, J.-C. Lozano, P. Schatt, H. Botebol, V. Vergé,
Transcriptional versus non-transcriptional clocks: A case study in Ostreococcus,
Marine Genomics 14, 17 (2014).
J. Wang, B. Pfeuty, Q. Thommen, M. C. Romano, M. Lefranc,
Minimal model of transcriptional elongation processes with pauses,
Phys. Rev. E 90, 050701 (2014).
J. Wang, M. Lefranc, Q. Thommen,
Stochastic oscillations induced by intrinsic fluctuations in a self-repressing gene,
Biophys. J. 107, 2403 (2014).
B Pfeuty, Q Thommen, F Corellou, EB Djouani‐Tahri, FY Bouget, M Lefranc,
Circadian clocks in changing weather and seasons: Lessons from the picoalga Ostreococcus tauri,
Bioessays 34 (9), 781-790 (2012)
Q Thommen, B Pfeuty, F Corellou, FY Bouget, M Lefranc
Robust and flexible response of the Ostreococcus tauri circadian clock to light/dark cycles of varying photoperiod
The FEBS journal 279 (18), 3432-3448 (2012)
Q Thommen, JC Garreau, V Zehnlé Quantum motor:
Directed wave-packet motion in an optical lattice
Physical Review A 84 (4), 043403 (2011)
B Pfeuty, Q Thommen, M Lefranc
Robust entrainment of circadian oscillators requires specific phase response curves
Biophysical journal 100 (11), 2557-2565 (2011)
PE Morant, Q Thommen, B Pfeuty, C Vandermoere, F Corellou, FY Bouget, M Lefranc,
A robust two-gene oscillator at the core of Ostreococcus tauri circadian clock
Chaos: An Interdisciplinary Journal of Nonlinear Science 20 (4), 045108 (2010)
Q Thommen, B Pfeuty, PE Morant, F Corellou, FY Bouget, M Lefranc
Robustness of circadian clocks to daylight fluctuations: hints from the picoeucaryote Ostreococcus tauri
PLoS computational biology 6 (11), e1000990 (2010)
PE Morant, Q Thommen, F Lemaire, C Vandermoëre, B Parent, M Lefranc,
Oscillations in the expression of a self-repressed gene induced by a slow transcriptional dynamics
Physical review letters 102 (6), 068104 (2009)

2002-2006

Q Thommen, P Mandel
Left-handed properties of erbium-doped crystals
Optics letters 31 (12), 1803-1805 (2006)
Q Thommen, P Mandel
Electromagnetically induced left handedness in optically excited four-level atomic media
Physical review letters 96 (5), 053601 (2006)
Q Thommen, JC Garreau, V Zehnlé
Quantum interference in a driven washboard potential
American journal of physics 72 (8), 1017-1025 (2004)
Q Thommen, JC Garreau, V Zehnlé
Atomic motion in tilted optical lattices: an analytical approach
Journal of Optics B: Quantum and Semiclassical Optics 6 (7), 301 (2004)
Q Thommen, JC Garreau, V Zehnlé
Classical chaos with Bose-Einstein condensates in tilted optical lattices
Physical review letters 91 (21), 210405 (2004)
Q Thommen, V Zehnlé, JC Garreau
Wave-packet reconstruction via local dynamics in a parabolic lattice
Physical Review A 67 (1), 013416 (2003)
Q Thommen, JC Garreau, V Zehnlé
Theoretical analysis of quantum dynamics in one-dimensional lattices: Wannier-Stark description
Physical Review A 65 (5), 053406 (2002)
P Dubois, Q Thommen, AC Jambon
In vivo measurement of surgical gestures
IEEE Transactions on Biomedical Engineering 49 (1), 49-54 (2002)

* K Braeckmans, R Xiong, M Layachi, A Treizebre, F Anquez, Q Thommen, E Courtade 
Procédé et dispositif pour fournir un écoulement microfluidique 
WO2020221883A1 (2020) 
 * A. Treizebre, Q. Thommen, J. Pesez, H. Damart, L. Liegois, E. Courtade
Dispositif et procédé de discrimination de spermatozoïdes
FR3061910 (2018).
* L. Liegeois, E. courtade H. Damart, J. Pesez, Q, Thommen, A.Treizebre,
Dispositif et procédé de sélection de cellules eucaryotes dans un canal de transport par altération des cellules  eucaryotes au moyen d’un rayonnement électromagnétique
FR3024738 A1 – WO2016024061A1 (2016).