Maude Pupin
Professeure des universités
CNU : SECTION 27 - INFORMATIQUE
Laboratoire / équipe
Contact
maude.pupin[chez]univ-lille[point].fr
+33 3 28 77 85 55
Cité scientifique, bâtiment M3 extension, bureau 208 et bâtiment ESPRIT, bureau S3.47
Publications
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"citationFull_s":"Blaise Waongo, Maude Pupin, Matthieu Duban, Gabrielle Chataigne, Oumarou Zongo, et al.. Kawal: A fermented food as a source of Bacillus strain producing antimicrobial peptides. <i>Scientific African</i>, 2023, 20, pp.e01714. <a target=\"_blank\" href=\"https://dx.doi.org/10.1016/j.sciaf.2023.e01714\">⟨10.1016/j.sciaf.2023.e01714⟩</a>. <a target=\"_blank\" href=\"https://hal.science/hal-04426241v1\">⟨hal-04426241⟩</a>",
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"citationFull_s":"Ammar Abdo, Maude Pupin. Turbo prediction: a new approach for bioactivity prediction. <i>Journal of Computer-Aided Molecular Design</i>, 2022, 36 (1), pp.77-85. <a target=\"_blank\" href=\"https://dx.doi.org/10.1007/s10822-021-00440-3\">⟨10.1007/s10822-021-00440-3⟩</a>. <a target=\"_blank\" href=\"https://cnrs.hal.science/hal-03833232v1\">⟨hal-03833232⟩</a>",
"title_s":["Turbo prediction: a new approach for bioactivity prediction"],
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"citationFull_s":"Emma Ricart, Maude Pupin, Markus Müller, Frédérique Lisacek. Automatic Annotation and Dereplication of Tandem Mass Spectra of Peptidic Natural Products. <i>Analytical Chemistry</i>, 2020, 92 (24), pp.15862-15871. <a target=\"_blank\" href=\"https://dx.doi.org/10.1021/acs.analchem.0c03208\">⟨10.1021/acs.analchem.0c03208⟩</a>. <a target=\"_blank\" href=\"https://hal.science/hal-03082142v1\">⟨hal-03082142⟩</a>",
"title_s":["Automatic Annotation and Dereplication of Tandem Mass Spectra of Peptidic Natural Products"],
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"citationFull_s":"Ammar Abdo, Eissa Ghaleb, Naser Alajmi, Maude Pupin. Monomer structure fingerprints: an extension of the monomer composition version for peptide databases. <i>Journal of Computer-Aided Molecular Design</i>, 2020, 34 (11), pp.1147-1156. <a target=\"_blank\" href=\"https://dx.doi.org/10.1007/s10822-020-00336-8\">⟨10.1007/s10822-020-00336-8⟩</a>. <a target=\"_blank\" href=\"https://hal.science/hal-03081813v1\">⟨hal-03081813⟩</a>",
"title_s":["Monomer structure fingerprints: an extension of the monomer composition version for peptide databases"],
"authFullName_s":["Ammar Abdo","Eissa Ghaleb","Naser Alajmi","Maude Pupin"],
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"citationFull_s":"Loïc Meunier, Pierre Tocquin, Luc Cornet, Damien Sirjacobs, Valérie Leclère, et al.. Palantir: a springboard for the analysis of secondary metabolite gene clusters in large-scale genome mining projects. <i>Bioinformatics</i>, 2020, 36 (15), pp.4345-4347. <a target=\"_blank\" href=\"https://dx.doi.org/10.1093/bioinformatics/btaa517\">⟨10.1093/bioinformatics/btaa517⟩</a>. <a target=\"_blank\" href=\"https://hal.science/hal-03081849v1\">⟨hal-03081849⟩</a>",
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"title_s":["Les filles qui… et L Codent L Créent : constituer un bien commun de médiation en informatique"],
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"citationFull_s":"Laure Bolka-Tabary, Maude Pupin, Yann Secq. Stage d’observation de troisième : “Wi Code, Wi Build”. <i>DIDAPRO 8 – DIDASTIC L’informatique, objets d’enseignements – enjeux épistémologiques, didactiques et de formation</i>, Feb 2020, Lille, France. <a target=\"_blank\" href=\"https://hal.science/hal-03081192v1\">⟨hal-03081192⟩</a>",
"title_s":["Stage d’observation de troisième : “Wi Code, Wi Build”"],
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"citationFull_s":"Matthieu Duban, Maude Pupin, Areski Flissi, L. Couderc, Hélène Touzet, et al.. Genome mining for screening and characterization of new lipopeptides with biocontrol applications.. <i>14emes rencontres plantes-bactéries</i>, Jan 2020, Aussois, France. <a target=\"_blank\" href=\"https://hal.science/hal-04547627v1\">⟨hal-04547627⟩</a>",
"title_s":["Genome mining for screening and characterization of new lipopeptides with biocontrol applications."],
"authFullName_s":["Matthieu Duban","Maude Pupin","Areski Flissi","L. Couderc","Hélène Touzet","Louis Meunier","Denis Baurain","Olumide Owolabi Omoboye","Monica Höfte","Alexandre Bricout","Alice Rochex","Mickaël Chevalier","Christophe Flahaut","Quassim Esmaël","Essaid Ait Barka","Philippe Jacques","Valérie Leclère"],
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"citationFull_s":"Emma Ricart, Valérie Leclère, Areski Flissi, Markus Mueller, Maude Pupin, et al.. rBAN: retro-biosynthetic analysis of nonribosomal peptides. <i>Journal of Cheminformatics</i>, 2019, 11 (1), pp.1-14. <a target=\"_blank\" href=\"https://dx.doi.org/10.1186/s13321-019-0335-x\">⟨10.1186/s13321-019-0335-x⟩</a>. <a target=\"_blank\" href=\"https://hal.science/hal-02167433v1\">⟨hal-02167433⟩</a>",
"title_s":["rBAN: retro-biosynthetic analysis of nonribosomal peptides"],
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"citationFull_s":"Mickael Chevalier, Emma Ricart, Emeline Hanozin, Maude Pupin, Philippe Jacques, et al.. Kendrick Mass Defect Approach Combined to NORINE Database for Molecular Formula Assignment of Nonribosomal Peptides. <i>Journal of The American Society for Mass Spectrometry</i>, 2019, 30 (12), pp.2608-2616. <a target=\"_blank\" href=\"https://dx.doi.org/10.1007/s13361-019-02314-3\">⟨10.1007/s13361-019-02314-3⟩</a>. <a target=\"_blank\" href=\"https://hal.science/hal-02417587v1\">⟨hal-02417587⟩</a>",
"title_s":["Kendrick Mass Defect Approach Combined to NORINE Database for Molecular Formula Assignment of Nonribosomal Peptides"],
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"title_s":["Challenge of nonribosomal peptide (NRP) identification: Kendrick mass defect for molecular formula assignment of NRPs."],
"authFullName_s":["Mickaël Chevalier","Emma Ricart","Emeline Hanozin","S Matthijs","Maude Pupin","Philippe Jacques","Nicolas Smargiasso","Edwin de Pauw","Frederique Lisacek","Valérie Leclère","Christophe Flahaut"],
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"authFullName_s":["Areski Flissi","Emma Ricart","Clémentine Campart","Mickael Chevalier","Yoann Dufresne","Juraj Michalik","Philippe Jacques","Christophe Flahaut","Frederique Lisacek","Valérie Leclère","Maude Pupin"],
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"citationFull_s":"Maude Pupin, Areski Flissi, Philippe Jacques, Valérie Leclère. Bioinformatics tools for the discovery of new lipopeptides with biocontrol applications. <i>European Journal of Plant Pathology</i>, 2018, <a target=\"_blank\" href=\"https://dx.doi.org/10.1007/s10658-018-1544-2\">⟨10.1007/s10658-018-1544-2⟩</a>. <a target=\"_blank\" href=\"https://hal.science/hal-01937890v1\">⟨hal-01937890⟩</a>",
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"title_s":["L codent, L créent: créations numériques artistiques pour démystifier l'informatique... au féminin! (descriptif d’atelier)"],
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"citationRef_s":"<i>womENcourage2017 - 4th ACM Europe Celebration of Women in Computing</i>, ACM, Sep 2017, Barcelona, Spain",
"citationFull_s":"Tatiana Rocher, Maude Pupin, Philippe Marquet, Yann Secq. How to make teenage girls love coding ?. <i>womENcourage2017 - 4th ACM Europe Celebration of Women in Computing</i>, ACM, Sep 2017, Barcelona, Spain. <a target=\"_blank\" href=\"https://inria.hal.science/hal-01552490v1\">⟨hal-01552490⟩</a>",
"title_s":["How to make teenage girls love coding ?"],
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"citationFull_s":"Qassim Esmaeel, Yoann Dufresne, Areski Flissi, Maude Pupin, Philippe Jacques, et al.. Norine, Florine, s2m : powerful bioinformatics resource and tools for the discovery of novel nonribosomal peptides, natural metabolites with versatile activities. <i>FEMS 2017 - 7th congress of Federation of European Microbiology societies</i>, Jul 2017, Valencia, Spain. <a target=\"_blank\" href=\"https://hal.science/hal-01888999v1\">⟨hal-01888999⟩</a>",
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"title_s":["Data updates on Norine, the reference Non-Ribosomal Peptide knowledge base"],
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"title_s":["How to make teenage girls love coding using Python and the visual arts orienting language Processing ?"],
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"citationRef_s":"<i>Environmental Science and Pollution Research</i>, 2017, <a target=\"_blank\" href=\"https://dx.doi.org/10.1007/s11356-017-9166-3\">⟨10.1007/s11356-017-9166-3⟩</a>",
"citationFull_s":"Qassim Esmaeel, Maude Pupin, Philippe Jacques, Valérie Leclère. Nonribosomal peptides and polyketides of Burkholderia: new compounds potentially implicated in biocontrol and pharmaceuticals. <i>Environmental Science and Pollution Research</i>, 2017, <a target=\"_blank\" href=\"https://dx.doi.org/10.1007/s11356-017-9166-3\">⟨10.1007/s11356-017-9166-3⟩</a>. <a target=\"_blank\" href=\"https://hal.science/hal-01548616v1\">⟨hal-01548616⟩</a>",
"title_s":["Nonribosomal peptides and polyketides of Burkholderia: new compounds potentially implicated in biocontrol and pharmaceuticals"],
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