Benjamin Pfeuty
Chargé de recherche epst
Laboratoire / équipe
Contact
benjamin.pfeuty[chez]univ-lille[point].fr
0320337018
Cité scientifique Villeneuve d'Ascq, Bat. P5, office 139
Publications
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"title_s":["Spatial self-organization of cancer stem cell niches revealed by live single-cell imaging"],
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"citationFull_s":"Benjamin Pfeuty. Free-energy transduction mechanisms shape the flux space of metabolic networks. <i>Biophysical Journal</i>, 2024, 123 (20), pp.3600-3611. <a target=\"_blank\" href=\"https://dx.doi.org/10.1016/j.bpj.2024.09.012\">⟨10.1016/j.bpj.2024.09.012⟩</a>. <a target=\"_blank\" href=\"https://hal.science/hal-04772800v1\">⟨hal-04772800⟩</a>",
"title_s":["Free-energy transduction mechanisms shape the flux space of metabolic networks"],
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"citationRef_s":"<i>Metabolites</i>, 2023, 13 (4), pp.485. <a target=\"_blank\" href=\"https://dx.doi.org/10.3390/metabo13040485\">⟨10.3390/metabo13040485⟩</a>",
"citationFull_s":"Benjamin Pfeuty, Julien Hurbain, Quentin Thommen. Control Analysis of Cooperativity and Complementarity in Metabolic Regulations: The Case of NADPH Homeostasis. <i>Metabolites</i>, 2023, 13 (4), pp.485. <a target=\"_blank\" href=\"https://dx.doi.org/10.3390/metabo13040485\">⟨10.3390/metabo13040485⟩</a>. <a target=\"_blank\" href=\"https://hal.science/hal-04277958v1\">⟨hal-04277958⟩</a>",
"title_s":["Control Analysis of Cooperativity and Complementarity in Metabolic Regulations: The Case of NADPH Homeostasis"],
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"citationFull_s":"Quentin Thommen, Julien Hurbain, Benjamin Pfeuty. Stochastic simulation algorithm for isotope-based dynamic flux analysis. <i>Metabolic Engineering</i>, 2022, 75, pp.100 - 109. <a target=\"_blank\" href=\"https://dx.doi.org/10.1016/j.ymben.2022.11.001\">⟨10.1016/j.ymben.2022.11.001⟩</a>. <a target=\"_blank\" href=\"https://hal.science/hal-04012821v1\">⟨hal-04012821⟩</a>",
"title_s":["Stochastic simulation algorithm for isotope-based dynamic flux analysis"],
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"citationRef_s":"<i>Journal of Theoretical Biology</i>, 2022, 539, pp.111060. <a target=\"_blank\" href=\"https://dx.doi.org/10.1016/j.jtbi.2022.111060\">⟨10.1016/j.jtbi.2022.111060⟩</a>",
"citationFull_s":"Benjamin Pfeuty. Multistability and transitions between spatiotemporal patterns through versatile Notch-Hes signaling. <i>Journal of Theoretical Biology</i>, 2022, 539, pp.111060. <a target=\"_blank\" href=\"https://dx.doi.org/10.1016/j.jtbi.2022.111060\">⟨10.1016/j.jtbi.2022.111060⟩</a>. <a target=\"_blank\" href=\"https://hal.science/hal-03826702v1\">⟨hal-03826702⟩</a>",
"title_s":["Multistability and transitions between spatiotemporal patterns through versatile Notch-Hes signaling"],
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"citationRef_s":"<i>iScience</i>, 2022, 25 (8), pp.104681. <a target=\"_blank\" href=\"https://dx.doi.org/10.1016/j.isci.2022.104681\">⟨10.1016/j.isci.2022.104681⟩</a>",
"citationFull_s":"Julien Hurbain, Quentin Thommen, Francois Anquez, Benjamin Pfeuty. Quantitative modeling of pentose phosphate pathway response to oxidative stress reveals a cooperative regulatory strategy. <i>iScience</i>, 2022, 25 (8), pp.104681. <a target=\"_blank\" href=\"https://dx.doi.org/10.1016/j.isci.2022.104681\">⟨10.1016/j.isci.2022.104681⟩</a>. <a target=\"_blank\" href=\"https://hal.science/hal-03826675v1\">⟨hal-03826675⟩</a>",
"title_s":["Quantitative modeling of pentose phosphate pathway response to oxidative stress reveals a cooperative regulatory strategy"],
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"citationFull_s":"Elke de Schutter, Jana Ramon, Benjamin Pfeuty, Caroline de Tender, Stephan Stremersch, et al.. Plasma membrane perforation by GSDME during apoptosis-driven secondary necrosis. <i>Cellular and Molecular Life Sciences</i>, 2022, 79 (1), pp.19. <a target=\"_blank\" href=\"https://dx.doi.org/10.1007/s00018-021-04078-0\">⟨10.1007/s00018-021-04078-0⟩</a>. <a target=\"_blank\" href=\"https://hal.science/hal-04012801v1\">⟨hal-04012801⟩</a>",
"title_s":["Plasma membrane perforation by GSDME during apoptosis-driven secondary necrosis"],
"authFullName_s":["Elke de Schutter","Jana Ramon","Benjamin Pfeuty","Caroline de Tender","Stephan Stremersch","Koen Raemdonck","Ken Op de Beeck","Wim Declercq","Franck B Riquet","Kevin Braeckmans","Peter Vandenabeele"],
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"citationFull_s":"Julien Hurbain, Darka Labavić, Quentin Thommen, Benjamin Pfeuty. Theoretical study of the impact of adaptation on cell-fate heterogeneity and fractional killing. <i>Scientific Reports</i>, 2020, 10 (1), <a target=\"_blank\" href=\"https://dx.doi.org/10.1038/s41598-020-74238-y\">⟨10.1038/s41598-020-74238-y⟩</a>. <a target=\"_blank\" href=\"https://hal.science/hal-03452396v1\">⟨hal-03452396⟩</a>",
"title_s":["Theoretical study of the impact of adaptation on cell-fate heterogeneity and fractional killing"],
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"citationFull_s":"Benjamin Pfeuty, Emmanuel Courtade, Quentin Thommen. Fine-tuned regulation of stress priming and thermotolerance. <i>Physical Biology</i>, 2020, <a target=\"_blank\" href=\"https://dx.doi.org/10.1101/2021.01.27.428215\">⟨10.1101/2021.01.27.428215⟩</a>. <a target=\"_blank\" href=\"https://hal.science/hal-03326008v1\">⟨hal-03326008⟩</a>",
"title_s":["Fine-tuned regulation of stress priming and thermotolerance"],
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"citationRef_s":"<i>International Journal of Hyperthermia</i>, 2020, 37 (1), pp.506-516. <a target=\"_blank\" href=\"https://dx.doi.org/10.1080/02656736.2020.1762005\">⟨10.1080/02656736.2020.1762005⟩</a>",
"citationFull_s":"D. Labavić, M. Ladjimi, Emmanuel Courtade, Benjamin Pfeuty. Mammalian cell sensitivity to hyperthermia in various cell lines: a new universal and predictive description. <i>International Journal of Hyperthermia</i>, 2020, 37 (1), pp.506-516. <a target=\"_blank\" href=\"https://dx.doi.org/10.1080/02656736.2020.1762005\">⟨10.1080/02656736.2020.1762005⟩</a>. <a target=\"_blank\" href=\"https://hal.science/hal-02900213v1\">⟨hal-02900213⟩</a>",
"title_s":["Mammalian cell sensitivity to hyperthermia in various cell lines: a new universal and predictive description"],
"authFullName_s":["D. Labavić","M. Ladjimi","Emmanuel Courtade","Benjamin Pfeuty"],
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"citationFull_s":"Darka Labavić, Mohamed Tahar Ladjimi, Quentin Thommen, Benjamin Pfeuty. Scaling laws of cell-fate responses to transient stress. <i>Journal of Theoretical Biology</i>, 2019, 478, pp.14-25. <a target=\"_blank\" href=\"https://dx.doi.org/10.1016/j.jtbi.2019.06.014\">⟨10.1016/j.jtbi.2019.06.014⟩</a>. <a target=\"_blank\" href=\"https://hal.science/hal-02334725v1\">⟨hal-02334725⟩</a>",
"title_s":["Scaling laws of cell-fate responses to transient stress"],
"authFullName_s":["Darka Labavić","Mohamed Tahar Ladjimi","Quentin Thommen","Benjamin Pfeuty"],
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"citationFull_s":"M. Ladjimi, D. Labavić, M. Guilbert, F. Anquez, Emmanuel Courtade, et al.. Dynamical thermal dose models and dose time-profile effects. <i>International Journal of Hyperthermia</i>, 2019, 36 (1), pp.721-729. <a target=\"_blank\" href=\"https://dx.doi.org/10.1080/02656736.2019.1633478\">⟨10.1080/02656736.2019.1633478⟩</a>. <a target=\"_blank\" href=\"https://hal.science/hal-02334723v1\">⟨hal-02334723⟩</a>",
"title_s":["Dynamical thermal dose models and dose time-profile effects"],
"authFullName_s":["M. Ladjimi","D. Labavić","M. Guilbert","F. Anquez","Emmanuel Courtade","Benjamin Pfeuty"],
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"citationRef_s":"<i>Biophysical Journal</i>, 2018, 114 (1), pp.237-248. <a target=\"_blank\" href=\"https://dx.doi.org/10.1016/j.bpj.2017.10.033\">⟨10.1016/j.bpj.2017.10.033⟩</a>",
"citationFull_s":"Benjamin Pfeuty, Clémence Kress, Bertrand Pain. Network Features and Dynamical Landscape of Naive and Primed Pluripotency. <i>Biophysical Journal</i>, 2018, 114 (1), pp.237-248. <a target=\"_blank\" href=\"https://dx.doi.org/10.1016/j.bpj.2017.10.033\">⟨10.1016/j.bpj.2017.10.033⟩</a>. <a target=\"_blank\" href=\"https://hal.science/hal-02334724v1\">⟨hal-02334724⟩</a>",
"title_s":["Network Features and Dynamical Landscape of Naive and Primed Pluripotency"],
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"citationRef_s":"<i>PLoS ONE</i>, 2016, 11 (8), pp.e0160247. <a target=\"_blank\" href=\"https://dx.doi.org/10.1371/journal.pone.0160247\">⟨10.1371/journal.pone.0160247⟩</a>",
"citationFull_s":"Benjamin Pfeuty, Quentin Thommen. Adaptive Benefits of Storage Strategy and Dual AMPK/TOR Signaling in Metabolic Stress Response. <i>PLoS ONE</i>, 2016, 11 (8), pp.e0160247. <a target=\"_blank\" href=\"https://dx.doi.org/10.1371/journal.pone.0160247\">⟨10.1371/journal.pone.0160247⟩</a>. <a target=\"_blank\" href=\"https://hal.science/hal-02900220v1\">⟨hal-02900220⟩</a>",
"title_s":["Adaptive Benefits of Storage Strategy and Dual AMPK/TOR Signaling in Metabolic Stress Response"],
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"citationFull_s":"Benjamin Pfeuty, K. Kaneko. Requirements for efficient cell-type proportioning: regulatory timescales, stochasticity and lateral inhibition. <i>Physical Biology</i>, 2016, 13 (2), pp.026007. <a target=\"_blank\" href=\"https://dx.doi.org/10.1088/1478-3975/13/2/026007\">⟨10.1088/1478-3975/13/2/026007⟩</a>. <a target=\"_blank\" href=\"https://hal.science/hal-02334726v1\">⟨hal-02334726⟩</a>",
"title_s":["Requirements for efficient cell-type proportioning: regulatory timescales, stochasticity and lateral inhibition"],
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"citationFull_s":"Benjamin Pfeuty, Quentin Thommen. Adaptive Benefits of Storage Strategy and dual AMPK/TOR Signaling in Metabolic\r\nStress Response. 2015. <a target=\"_blank\" href=\"https://hal.science/hal-01206918v1\">⟨hal-01206918⟩</a>",
"title_s":["Adaptive Benefits of Storage Strategy and dual AMPK/TOR Signaling in Metabolic Stress Response"],
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"citationRef_s":"<i>Neurogenesis</i>, 2015, 2 (1), pp.e1095694. <a target=\"_blank\" href=\"https://dx.doi.org/10.1080/23262133.2015.1095694\">⟨10.1080/23262133.2015.1095694⟩</a>",
"citationFull_s":"Benjamin Pfeuty. Neuronal specification exploits the inherent flexibility of cell-cycle gap phases. <i>Neurogenesis</i>, 2015, 2 (1), pp.e1095694. <a target=\"_blank\" href=\"https://dx.doi.org/10.1080/23262133.2015.1095694\">⟨10.1080/23262133.2015.1095694⟩</a>. <a target=\"_blank\" href=\"https://hal.science/hal-02334727v1\">⟨hal-02334727⟩</a>",
"title_s":["Neuronal specification exploits the inherent flexibility of cell-cycle gap phases"],
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"citationRef_s":"<i>Frontiers in Genetics</i>, 2015, 6, pp.65. <a target=\"_blank\" href=\"https://dx.doi.org/10.3389/fgene.2015.00065\">⟨10.3389/fgene.2015.00065⟩</a>",
"citationFull_s":"Quentin Thommen, Benjamin Pfeuty, Philippe Schatt, Amandine, Bijoux, François-Yves Bouget, et al.. Probing entrainment of Ostreococcus tauri circadian clock by green and blue light through a mathematical modeling approach. <i>Frontiers in Genetics</i>, 2015, 6, pp.65. <a target=\"_blank\" href=\"https://dx.doi.org/10.3389/fgene.2015.00065\">⟨10.3389/fgene.2015.00065⟩</a>. <a target=\"_blank\" href=\"https://hal.science/hal-01207119v1\">⟨hal-01207119⟩</a>",
"title_s":["Probing entrainment of Ostreococcus tauri circadian clock by green and blue light through a mathematical modeling approach"],
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"citationRef_s":"<i>Development (Cambridge, England)</i>, 2015, pp.477",
"citationFull_s":"Benjamin Pfeuty. A computational model for the coordination of neural progenitor self-renewal and differentiation through Hes1 dynamics.. <i>Development (Cambridge, England)</i>, 2015, pp.477. <a target=\"_blank\" href=\"https://hal.science/hal-01130252v1\">⟨hal-01130252⟩</a>",
"title_s":["A computational model for the coordination of neural progenitor self-renewal and differentiation through Hes1 dynamics."],
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"citationRef_s":"<i>Physical Review E : Statistical, Nonlinear, and Soft Matter Physics</i>, 2014, 90, pp.050701(R). <a target=\"_blank\" href=\"https://dx.doi.org/10.1103/PhysRevE.90.050701\">⟨10.1103/PhysRevE.90.050701⟩</a>",
"citationFull_s":"Jingkui Wang, Benjamin Pfeuty, Quentin Thommen, M. Carmen Romano, Marc Lefranc. Minimal model of transcriptional elongation processes with pauses. <i>Physical Review E : Statistical, Nonlinear, and Soft Matter Physics</i>, 2014, 90, pp.050701(R). <a target=\"_blank\" href=\"https://dx.doi.org/10.1103/PhysRevE.90.050701\">⟨10.1103/PhysRevE.90.050701⟩</a>. <a target=\"_blank\" href=\"https://hal.science/hal-01084267v1\">⟨hal-01084267⟩</a>",
"title_s":["Minimal model of transcriptional elongation processes with pauses"],
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"citationRef_s":"<i>Cell Cycle</i>, 2014, 7 (20), pp.3246-3257. <a target=\"_blank\" href=\"https://dx.doi.org/10.4161/cc.7.20.6853\">⟨10.4161/cc.7.20.6853⟩</a>",
"citationFull_s":"Benjamin Pfeuty, Thérèse David-Pfeuty, Kunihiko Kaneko. Underlying principles of cell fate determination during G1 phase of the mammalian cell cycle. <i>Cell Cycle</i>, 2014, 7 (20), pp.3246-3257. <a target=\"_blank\" href=\"https://dx.doi.org/10.4161/cc.7.20.6853\">⟨10.4161/cc.7.20.6853⟩</a>. <a target=\"_blank\" href=\"https://hal.science/hal-02900212v1\">⟨hal-02900212⟩</a>",
"title_s":["Underlying principles of cell fate determination during G1 phase of the mammalian cell cycle"],
"authFullName_s":["Benjamin Pfeuty","Thérèse David-Pfeuty","Kunihiko Kaneko"],
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"citationRef_s":"<i>Physical Review E : Statistical, Nonlinear, and Soft Matter Physics</i>, 2014, pp.022707",
"citationFull_s":"Benjamin Pfeuty. Reliable binary cell-fate decisions based on oscillations.. <i>Physical Review E : Statistical, Nonlinear, and Soft Matter Physics</i>, 2014, pp.022707. <a target=\"_blank\" href=\"https://hal.science/hal-01130263v1\">⟨hal-01130263⟩</a>",
"title_s":["Reliable binary cell-fate decisions based on oscillations."],
"authFullName_s":["Benjamin Pfeuty"],
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"citationRef_s":"<i>Phase Response Curves in Neuroscience</i>, Springer New York, pp.361-398, 2012, <a target=\"_blank\" href=\"https://dx.doi.org/10.1007/978-1-4614-0739-3_15\">⟨10.1007/978-1-4614-0739-3_15⟩</a>",
"citationFull_s":"David Hansel, Germán Mato, Benjamin Pfeuty. The Role of Intrinsic Cell Properties in Synchrony of Neurons Interacting via Electrical Synapses. <i>Phase Response Curves in Neuroscience</i>, Springer New York, pp.361-398, 2012, <a target=\"_blank\" href=\"https://dx.doi.org/10.1007/978-1-4614-0739-3_15\">⟨10.1007/978-1-4614-0739-3_15⟩</a>. <a target=\"_blank\" href=\"https://hal.science/hal-02900226v1\">⟨hal-02900226⟩</a>",
"title_s":["The Role of Intrinsic Cell Properties in Synchrony of Neurons Interacting via Electrical Synapses"],
"authFullName_s":["David Hansel","Germán Mato","Benjamin Pfeuty"],
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"citationRef_s":"<i>Physical Review E : Statistical, Nonlinear, and Soft Matter Physics</i>, 2012, 86 (2 Pt 1), pp.021917",
"citationFull_s":"Benjamin Pfeuty. Dynamical principles of cell-cycle arrest: reversible, irreversible, and mixed strategies.. <i>Physical Review E : Statistical, Nonlinear, and Soft Matter Physics</i>, 2012, 86 (2 Pt 1), pp.021917. <a target=\"_blank\" href=\"https://hal.science/hal-00880591v1\">⟨hal-00880591⟩</a>",
"title_s":["Dynamical principles of cell-cycle arrest: reversible, irreversible, and mixed strategies."],
"authFullName_s":["Benjamin Pfeuty"],
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"citationRef_s":"<i>PLoS ONE</i>, 2012, 7 (4), pp.e35291. <a target=\"_blank\" href=\"https://dx.doi.org/10.1371/journal.pone.0035291\">⟨10.1371/journal.pone.0035291⟩</a>",
"citationFull_s":"Benjamin Pfeuty. Strategic Cell-Cycle Regulatory Features That Provide Mammalian Cells with Tunable G1 Length and Reversible G1 Arrest. <i>PLoS ONE</i>, 2012, 7 (4), pp.e35291. <a target=\"_blank\" href=\"https://dx.doi.org/10.1371/journal.pone.0035291\">⟨10.1371/journal.pone.0035291⟩</a>. <a target=\"_blank\" href=\"https://hal.science/hal-02900222v1\">⟨hal-02900222⟩</a>",
"title_s":["Strategic Cell-Cycle Regulatory Features That Provide Mammalian Cells with Tunable G1 Length and Reversible G1 Arrest"],
"authFullName_s":["Benjamin Pfeuty"],
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"citationRef_s":"<i>PLoS Computational Biology</i>, 2012, 8 (1), pp.e1002329. <a target=\"_blank\" href=\"https://dx.doi.org/10.1371/journal.pcbi.1002329\">⟨10.1371/journal.pcbi.1002329⟩</a>",
"citationFull_s":"Benjamin Pfeuty, Jean-Francois Bodart, Ralf Blossey, Marc Lefranc. A Dynamical Model of Oocyte Maturation Unveils Precisely Orchestrated Meiotic Decisions. <i>PLoS Computational Biology</i>, 2012, 8 (1), pp.e1002329. <a target=\"_blank\" href=\"https://dx.doi.org/10.1371/journal.pcbi.1002329\">⟨10.1371/journal.pcbi.1002329⟩</a>. <a target=\"_blank\" href=\"https://hal.science/hal-02900241v1\">⟨hal-02900241⟩</a>",
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