Areski Flissi
Ingénieur de recherche cnrs
Laboratoire / équipe
Publications
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"citationRef_s":"<i>Journées Ouvertes en Biologie, Informatique et Mathématiques (JOBIM 2022)</i>, Jul 2022, Rennes, France. <a target=\"_blank\" href=\"https://jobim2022.sciencesconf.org/\"></a>",
"citationFull_s":"Loïc Couderc, Erwan Gueguen, Maxime Brunin, Areski Flissi, Guillemette Marot, et al.. TnSeek : analysing Tn-seq data for multiple conditions and multiple species. <i>Journées Ouvertes en Biologie, Informatique et Mathématiques (JOBIM 2022)</i>, Jul 2022, Rennes, France. <a target=\"_blank\" href=\"https://jobim2022.sciencesconf.org/\"></a>. <a target=\"_blank\" href=\"https://hal.science/hal-03827389v1\">⟨hal-03827389⟩</a>",
"title_s":["TnSeek : analysing Tn-seq data for multiple conditions and multiple species"],
"authFullName_s":["Loïc Couderc","Erwan Gueguen","Maxime Brunin","Areski Flissi","Guillemette Marot","Guy Condemine","Hélène Touzet"],
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"citationRef_s":"<i>4. International Ewinia workshop (IEW)</i>, Jul 2022, Assise, Italy",
"citationFull_s":"Julie Baltenneck, Hajar Ben Moussa, Loïc Couderc, Areski Flissi, Jacques Pédron, et al.. Tn-phyto: essential genomes of nine bacterial phytopathogens. <i>4. International Ewinia workshop (IEW)</i>, Jul 2022, Assise, Italy. <a target=\"_blank\" href=\"https://hal.science/hal-03721522v1\">⟨hal-03721522⟩</a>",
"title_s":["Tn-phyto: essential genomes of nine bacterial phytopathogens"],
"authFullName_s":["Julie Baltenneck","Hajar Ben Moussa","Loïc Couderc","Areski Flissi","Jacques Pédron","Cindy E. Morris","Marie-Anne Barny","Odile Berge","Hélène Touzet","Erwan Gueguen","Guy Condemine"],
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"citationRef_s":"<i>15. Rencontres Plantes Bactéries</i>, Jan 2022, Aussois, France",
"citationFull_s":"Julie Baltenneck, Hajar Ben Moussa, Loïc Couderc, Areski Flissi, Jacques Pédron, et al.. Tn-phyto: essential genomes of nine bacterial phytopathogens. <i>15. Rencontres Plantes Bactéries</i>, Jan 2022, Aussois, France. <a target=\"_blank\" href=\"https://hal.science/hal-04649988v1\">⟨hal-04649988⟩</a>",
"title_s":["Tn-phyto: essential genomes of nine bacterial phytopathogens"],
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"citationFull_s":"Hélène Touzet, Areski Flissi, Loïc Couderc. TnSeek. 2022, <a target=\"_blank\" style=\"word-break: break-all;\" href=\"https://archive.softwareheritage.org/browse/swh:1:dir:5a4d461bfa0edddb5f36eda76bbc1eb93b32f26e;origin=https://hal.archives-ouvertes.fr/hal-04441970;visit=swh:1:snp:dccee2e5c5a988bcc927a55dd922c7ba6eca4a46;anchor=swh:1:rel:a832b435ac7524297ea6f2105444ca86e82f22db;path=/\">⟨swh:1:dir:5a4d461bfa0edddb5f36eda76bbc1eb93b32f26e;origin=https://hal.archives-ouvertes.fr/hal-04441970;visit=swh:1:snp:dccee2e5c5a988bcc927a55dd922c7ba6eca4a46;anchor=swh:1:rel:a832b435ac7524297ea6f2105444ca86e82f22db;path=/⟩</a>. <a target=\"_blank\" href=\"https://hal.science/hal-04441970v1\">⟨hal-04441970⟩</a>",
"title_s":["TnSeek"],
"authFullName_s":["Hélène Touzet","Areski Flissi","Loïc Couderc"],
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"citationRef_s":"<i>14emes rencontres plantes-bactéries</i>, Jan 2020, Aussois, France",
"citationFull_s":"Matthieu Duban, Maude Pupin, Areski Flissi, L. Couderc, Hélène Touzet, et al.. Genome mining for screening and characterization of new lipopeptides with biocontrol applications.. <i>14emes rencontres plantes-bactéries</i>, Jan 2020, Aussois, France. <a target=\"_blank\" href=\"https://hal.science/hal-04547627v1\">⟨hal-04547627⟩</a>",
"title_s":["Genome mining for screening and characterization of new lipopeptides with biocontrol applications."],
"authFullName_s":["Matthieu Duban","Maude Pupin","Areski Flissi","L. Couderc","Hélène Touzet","Louis Meunier","Denis Baurain","Olumide Owolabi Omoboye","Monica Höfte","Alexandre Bricout","Alice Rochex","Mickaël Chevalier","Christophe Flahaut","Quassim Esmaël","Essaid Ait Barka","Philippe Jacques","Valérie Leclère"],
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"citationRef_s":"<i>Journal of Cheminformatics</i>, 2019, 11 (1), pp.1-14. <a target=\"_blank\" href=\"https://dx.doi.org/10.1186/s13321-019-0335-x\">⟨10.1186/s13321-019-0335-x⟩</a>",
"citationFull_s":"Emma Ricart, Valérie Leclère, Areski Flissi, Markus Mueller, Maude Pupin, et al.. rBAN: retro-biosynthetic analysis of nonribosomal peptides. <i>Journal of Cheminformatics</i>, 2019, 11 (1), pp.1-14. <a target=\"_blank\" href=\"https://dx.doi.org/10.1186/s13321-019-0335-x\">⟨10.1186/s13321-019-0335-x⟩</a>. <a target=\"_blank\" href=\"https://hal.science/hal-02167433v1\">⟨hal-02167433⟩</a>",
"title_s":["rBAN: retro-biosynthetic analysis of nonribosomal peptides"],
"authFullName_s":["Emma Ricart","Valérie Leclère","Areski Flissi","Markus Mueller","Maude Pupin","Frederique Lisacek"],
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"producedDateY_i":2019
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"citationRef_s":"<i>Nucleic Acids Research</i>, 2019, <a target=\"_blank\" href=\"https://dx.doi.org/10.1093/nar/gkz1000\">⟨10.1093/nar/gkz1000⟩</a>",
"citationFull_s":"Areski Flissi, Emma Ricart, Clémentine Campart, Mickael Chevalier, Yoann Dufresne, et al.. Norine: update of the nonribosomal peptide resource. <i>Nucleic Acids Research</i>, 2019, <a target=\"_blank\" href=\"https://dx.doi.org/10.1093/nar/gkz1000\">⟨10.1093/nar/gkz1000⟩</a>. <a target=\"_blank\" href=\"https://hal.science/hal-02376009v1\">⟨hal-02376009⟩</a>",
"title_s":["Norine: update of the nonribosomal peptide resource"],
"authFullName_s":["Areski Flissi","Emma Ricart","Clémentine Campart","Mickael Chevalier","Yoann Dufresne","Juraj Michalik","Philippe Jacques","Christophe Flahaut","Frederique Lisacek","Valérie Leclère","Maude Pupin"],
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"citationRef_s":"<i>European Journal of Plant Pathology</i>, 2018, <a target=\"_blank\" href=\"https://dx.doi.org/10.1007/s10658-018-1544-2\">⟨10.1007/s10658-018-1544-2⟩</a>",
"citationFull_s":"Maude Pupin, Areski Flissi, Philippe Jacques, Valérie Leclère. Bioinformatics tools for the discovery of new lipopeptides with biocontrol applications. <i>European Journal of Plant Pathology</i>, 2018, <a target=\"_blank\" href=\"https://dx.doi.org/10.1007/s10658-018-1544-2\">⟨10.1007/s10658-018-1544-2⟩</a>. <a target=\"_blank\" href=\"https://hal.science/hal-01937890v1\">⟨hal-01937890⟩</a>",
"title_s":["Bioinformatics tools for the discovery of new lipopeptides with biocontrol applications"],
"authFullName_s":["Maude Pupin","Areski Flissi","Philippe Jacques","Valérie Leclère"],
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"citationRef_s":"<i>FEMS 2017 - 7th congress of Federation of European Microbiology societies</i>, Jul 2017, Valencia, Spain",
"citationFull_s":"Qassim Esmaeel, Yoann Dufresne, Areski Flissi, Maude Pupin, Philippe Jacques, et al.. Norine, Florine, s2m : powerful bioinformatics resource and tools for the discovery of novel nonribosomal peptides, natural metabolites with versatile activities. <i>FEMS 2017 - 7th congress of Federation of European Microbiology societies</i>, Jul 2017, Valencia, Spain. <a target=\"_blank\" href=\"https://hal.science/hal-01888999v1\">⟨hal-01888999⟩</a>",
"title_s":["Norine, Florine, s2m : powerful bioinformatics resource and tools for the discovery of novel nonribosomal peptides, natural metabolites with versatile activities"],
"authFullName_s":["Qassim Esmaeel","Yoann Dufresne","Areski Flissi","Maude Pupin","Philippe Jacques","Valérie Leclère"],
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"citationFull_s":"Yoann Dufresne, Juraj Michalik, Areski Flissi, Valérie Leclère, Maude Pupin. Data updates on Norine, the reference Non-Ribosomal Peptide knowledge base. <i>JOBIM 2017 - Journées Ouvertes en Biologie, Informatique et Mathématiques</i>, Jul 2017, Lille, France. <a target=\"_blank\" href=\"https://hal.science/hal-01889117v1\">⟨hal-01889117⟩</a>",
"title_s":["Data updates on Norine, the reference Non-Ribosomal Peptide knowledge base"],
"authFullName_s":["Yoann Dufresne","Juraj Michalik","Areski Flissi","Valérie Leclère","Maude Pupin"],
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"citationRef_s":"<i>Synthetic and Systems Biotechnology</i>, 2015, <a target=\"_blank\" href=\"https://dx.doi.org/10.1016/j.synbio.2015.11.001\">⟨10.1016/j.synbio.2015.11.001⟩</a>",
"citationFull_s":"Maude Pupin, Qassim Esmaeel, Areski Flissi, Yoann Dufresne, Philippe Jacques, et al.. Norine: a powerful resource for novel nonribosomal peptide discovery. <i>Synthetic and Systems Biotechnology</i>, 2015, <a target=\"_blank\" href=\"https://dx.doi.org/10.1016/j.synbio.2015.11.001\">⟨10.1016/j.synbio.2015.11.001⟩</a>. <a target=\"_blank\" href=\"https://inria.hal.science/hal-01250614v1\">⟨hal-01250614⟩</a>",
"title_s":["Norine: a powerful resource for novel nonribosomal peptide discovery"],
"authFullName_s":["Maude Pupin","Qassim Esmaeel","Areski Flissi","Yoann Dufresne","Philippe Jacques","Valérie Leclère"],
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"citationFull_s":"Areski Flissi, Yoann Dufresne, Juraj Michalik, Laurie Tonon, Stéphane Janot, et al.. Norine, the knowledgebase dedicated to non-ribosomal peptides, is now open to crowdsourcing. <i>Nucleic Acids Research</i>, 2015, <a target=\"_blank\" href=\"https://dx.doi.org/10.1093/nar/gkv1143\">⟨10.1093/nar/gkv1143⟩</a>. <a target=\"_blank\" href=\"https://hal.science/hal-01235996v1\">⟨hal-01235996⟩</a>",
"title_s":["Norine, the knowledgebase dedicated to non-ribosomal peptides, is now open to crowdsourcing"],
"authFullName_s":["Areski Flissi","Yoann Dufresne","Juraj Michalik","Laurie Tonon","Stéphane Janot","Laurent Noé","Philippe Jacques","Valérie Leclère","Maude Pupin"],
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"citationRef_s":"<i>The 16th International ACM Sigsoft Symposium on Component-Based Software Engineering (CBSE'2013)</i>, Jun 2013, Vancouver, Canada. pp.10",
"citationFull_s":"Gilles Vanwormhoudt, Areski Flissi. CIAO: A Component Model and its OSGi Framework for Dynamically Adaptable Telephony Applications. <i>The 16th International ACM Sigsoft Symposium on Component-Based Software Engineering (CBSE'2013)</i>, Jun 2013, Vancouver, Canada. pp.10. <a target=\"_blank\" href=\"https://hal.science/hal-00819858v1\">⟨hal-00819858⟩</a>",
"title_s":["CIAO: A Component Model and its OSGi Framework for Dynamically Adaptable Telephony Applications"],
"authFullName_s":["Gilles Vanwormhoudt","Areski Flissi"],
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"citationRef_s":"<i>GDR GPL 2013</i>, Apr 2013, Nancy, France. pp.216-217",
"citationFull_s":"Areski Flissi, Gilles Vanwormhoudt. CIAO : modèle de composants et framework OSGi pour des applications télécoms adaptables dynamiquement. <i>GDR GPL 2013</i>, Apr 2013, Nancy, France. pp.216-217. <a target=\"_blank\" href=\"https://hal.science/hal-00808992v1\">⟨hal-00808992⟩</a>",
"title_s":["CIAO : modèle de composants et framework OSGi pour des applications télécoms adaptables dynamiquement"],
"authFullName_s":["Areski Flissi","Gilles Vanwormhoudt"],
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"citationRef_s":"<i>Conférence en Ingénierie du Logiciel (CIEL 2012)</i>, Jun 2012, Rennes, France. pp.1-6",
"citationFull_s":"Areski Flissi, Gilles Vanwormhoudt. Programmation orientée domaine pour les services télécoms : concepts, DSL et outillage. <i>Conférence en Ingénierie du Logiciel (CIEL 2012)</i>, Jun 2012, Rennes, France. pp.1-6. <a target=\"_blank\" href=\"https://hal.science/hal-00711127v1\">⟨hal-00711127⟩</a>",
"title_s":["Programmation orientée domaine pour les services télécoms : concepts, DSL et outillage"],
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"citationRef_s":"<i>IDM 2011</i>, Jun 2011, Lille, France. pp.47-50",
"citationFull_s":"Areski Flissi, Gilles Vanwormhoudt. Conception de services télécoms : Une approche IDM à base d'acteurs, sessions et rôles.. <i>IDM 2011</i>, Jun 2011, Lille, France. pp.47-50. <a target=\"_blank\" href=\"https://hal.science/hal-00609518v1\">⟨hal-00609518⟩</a>",
"title_s":["Conception de services télécoms : Une approche IDM à base d'acteurs, sessions et rôles."],
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"producedDateY_i":2011
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"citationRef_s":"<i>11th Distributed Applications and Interoperable Systems (DAIS)</i>, Jun 2011, Reykjavik, Iceland. pp.77-91, <a target=\"_blank\" href=\"https://dx.doi.org/10.1007/978-3-642-21387-8_7\">⟨10.1007/978-3-642-21387-8_7⟩</a>",
"citationFull_s":"Gilles Vanwormhoudt, Areski Flissi. Session-Based Role Programming for the Design of Advanced Telephony Applications. <i>11th Distributed Applications and Interoperable Systems (DAIS)</i>, Jun 2011, Reykjavik, Iceland. pp.77-91, <a target=\"_blank\" href=\"https://dx.doi.org/10.1007/978-3-642-21387-8_7\">⟨10.1007/978-3-642-21387-8_7⟩</a>. <a target=\"_blank\" href=\"https://hal.science/hal-00609512v1\">⟨hal-00609512⟩</a>",
"title_s":["Session-Based Role Programming for the Design of Advanced Telephony Applications"],
"authFullName_s":["Gilles Vanwormhoudt","Areski Flissi"],
"halId_s":"hal-00609512",
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"producedDateY_i":2011
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"citationRef_s":"2009, pp.21-26",
"citationFull_s":"Christophe Gransart, Areski Flissi. Infrastructure ubiquitaire à base de composants logiciels pour des services de transports.. 2009, pp.21-26. <a target=\"_blank\" href=\"https://hal.science/hal-00582952v1\">⟨hal-00582952⟩</a>",
"title_s":["Infrastructure ubiquitaire à base de composants logiciels pour des services de transports."],
"authFullName_s":["Christophe Gransart","Areski Flissi"],
"halId_s":"hal-00582952",
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"citationRef_s":"<i>Journées nationales du GDR CNRS GPL (Génie de la Programmation et du Logiciel)</i>, Jan 2009, Toulouse, France",
"citationFull_s":"Olivier Caron, Bernard Carré, Areski Flissi, Alexis Muller, Gilles Vanwormhoudt. Conception de systèmes par applications de modèles paramétrés. <i>Journées nationales du GDR CNRS GPL (Génie de la Programmation et du Logiciel)</i>, Jan 2009, Toulouse, France. <a target=\"_blank\" href=\"https://hal.science/hal-00714122v2\">⟨hal-00714122v2⟩</a>",
"title_s":["Conception de systèmes par applications de modèles paramétrés"],
"authFullName_s":["Olivier Caron","Bernard Carré","Areski Flissi","Alexis Muller","Gilles Vanwormhoudt"],
"halId_s":"hal-00714122",
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"citationRef_s":"2009",
"citationFull_s":"Gilles Vanwormhoudt, Areski Flissi. EMFScript : Scripting méta-réflexif de modèles dans l'environnement EMF. 2009. <a target=\"_blank\" href=\"https://hal.science/hal-00654335v1\">⟨hal-00654335⟩</a>",
"title_s":["EMFScript : Scripting méta-réflexif de modèles dans l'environnement EMF"],
"authFullName_s":["Gilles Vanwormhoudt","Areski Flissi"],
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"producedDateY_i":2009
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"citationRef_s":"<i>Eighth IEEE International Symposium on Cluster Computing and the Grid</i>, May 2008, France. pp.177-184, <a target=\"_blank\" href=\"https://dx.doi.org/10.1109/CCGRID.2008.59\">⟨10.1109/CCGRID.2008.59⟩</a>",
"citationFull_s":"Areski Flissi, Jérémy Dubus, Nicolas Dolet, Philippe Merle. Deploying on the Grid with DeployWare. <i>Eighth IEEE International Symposium on Cluster Computing and the Grid</i>, May 2008, France. pp.177-184, <a target=\"_blank\" href=\"https://dx.doi.org/10.1109/CCGRID.2008.59\">⟨10.1109/CCGRID.2008.59⟩</a>. <a target=\"_blank\" href=\"https://hal.science/hal-00259836v1\">⟨hal-00259836⟩</a>",
"title_s":["Deploying on the Grid with DeployWare"],
"authFullName_s":["Areski Flissi","Jérémy Dubus","Nicolas Dolet","Philippe Merle"],
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"citationRef_s":"<i>Revue des Sciences et Technologies de l'Information - Série L'Objet : logiciel, bases de données, réseaux</i>, 2008, 14 (1-2), pp.35-39. <a target=\"_blank\" href=\"https://dx.doi.org/10.3166/obj.14.1-2.35-59\">⟨10.3166/obj.14.1-2.35-59⟩</a>",
"citationFull_s":"Jérémy Dubus, Areski Flissi, Nicolas Dolet, Philippe Merle. Une démarche orientée modèle pour déployer des systèmes logiciels répartis. <i>Revue des Sciences et Technologies de l'Information - Série L'Objet : logiciel, bases de données, réseaux</i>, 2008, 14 (1-2), pp.35-39. <a target=\"_blank\" href=\"https://dx.doi.org/10.3166/obj.14.1-2.35-59\">⟨10.3166/obj.14.1-2.35-59⟩</a>. <a target=\"_blank\" href=\"https://hal.science/hal-00269988v1\">⟨hal-00269988⟩</a>",
"title_s":["Une démarche orientée modèle pour déployer des systèmes logiciels répartis"],
"authFullName_s":["Jérémy Dubus","Areski Flissi","Nicolas Dolet","Philippe Merle"],
"halId_s":"hal-00269988",
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"producedDateY_i":2008
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